A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4168827



Internal ID20386782
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:132040586..132049537hg38UCSC Ensembl
chr8:133052833..133061784hg19UCSC Ensembl
Cytoband8q24.22
Allele length
AssemblyAllele length
hg388952
hg198952
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15930862
Samples
Known GenesOC90
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4168827
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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