A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4166855



Internal ID20385338
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:99844948..99854998hg38UCSC Ensembl
chr7:99442571..99452621hg19UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg3810051
hg1910051
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15920592
Samples
Known GenesCYP3A43
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4166855
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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