A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4162593



Internal ID20382227
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:99042..430852hg38UCSC Ensembl
chr9:99042..430852hg19UCSC Ensembl
Cytoband9p24.3
Allele length
AssemblyAllele length
hg38331811
hg19331811
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2668n166
Supporting Variantsnssv15984855
Samples
Known GenesC9orf66, CBWD1, DOCK8, FOXD4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4162593
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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