A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4160414



Internal ID20033949
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:97969693..98008239hg38UCSC Ensembl
chr7:97599005..97637551hg19UCSC Ensembl
Cytoband7q21.3
Allele length
AssemblyAllele length
hg3838547
hg1938547
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15981868
Samples
Known GenesMGC72080, OCM2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4160414
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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