A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4159900



Internal ID20380277
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:2030324..2262440hg38UCSC Ensembl
chr8:1978490..2208228hg19UCSC Ensembl
Cytoband8p23.2
Allele length
AssemblyAllele length
hg38232117
hg19229739
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15924239
Samples
Known GenesMIR7160, MYOM2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4159900
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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