A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4159600



Internal ID20033376
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:97774704..97984872hg38UCSC Ensembl
chr8:98786932..98997100hg19UCSC Ensembl
Cytoband8q22.1
Allele length
AssemblyAllele length
hg38210169
hg19210169
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15983774
Samples
Known GenesLAPTM4B, MATN2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4159600
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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