A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4159521



Internal ID20380001
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:67172615..67173698hg38UCSC Ensembl
chr8:68084850..68085933hg19UCSC Ensembl
Cytoband8q13.2
Allele length
AssemblyAllele length
hg381084
hg191084
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15926523
Samples
Known GenesCSPP1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4159521
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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