A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4159341



Internal ID20379868
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:121094988..121097645hg38UCSC Ensembl
chr7:120735042..120737699hg19UCSC Ensembl
Cytoband7q31.31
Allele length
AssemblyAllele length
hg382658
hg192658
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15923730
Samples
Known GenesCPED1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4159341
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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