A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4157616



Internal ID20378619
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:54043925..54055704hg38UCSC Ensembl
chr8:54956485..54968264hg19UCSC Ensembl
Cytoband8q11.23
Allele length
AssemblyAllele length
hg3811780
hg1911780
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15984242
Samples
Known GenesLYPLA1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4157616
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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