A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4156498



Internal ID20031112
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:58493463..58504165hg38UCSC Ensembl
chr8:59406022..59416724hg19UCSC Ensembl
Cytoband8q12.1
Allele length
AssemblyAllele length
hg3810703
hg1910703
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15929176
Samples
Known GenesCYP7A1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4156498
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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