A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4154467



Internal ID20029649
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:119953778..119996602hg38UCSC Ensembl
chr8:120966018..121008841hg19UCSC Ensembl
Cytoband8q24.12
Allele length
AssemblyAllele length
hg3842825
hg1942824
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15929409
Samples
Known GenesDEPTOR
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4154467
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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