A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4154182



Internal ID20029430
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:107597778..107599380hg38UCSC Ensembl
chr7:107238223..107239825hg19UCSC Ensembl
Cytoband7q22.3
Allele length
AssemblyAllele length
hg381603
hg191603
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15921194
Samples
Known GenesBCAP29
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4154182
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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