A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4154016



Internal ID20029315
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:3641368..6240005hg38UCSC Ensembl
chr8:3498890..6097526hg19UCSC Ensembl
Cytoband8p23.2
Allele length
AssemblyAllele length
hg382598638
hg192598637
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2526n166
Supporting Variantsnssv15982283
Samples
Known GenesCSMD1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4154016
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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