A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4149160



Internal ID20025786
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:127157783..127160229hg38UCSC Ensembl
chr6:127478928..127481374hg19UCSC Ensembl
Cytoband6q22.33
Allele length
AssemblyAllele length
hg382447
hg192447
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15914811
Samples
Known GenesRSPO3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4149160
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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