A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4148529



Internal ID20025345
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:93617744..93712810hg38UCSC Ensembl
chr6:94327462..94422528hg19UCSC Ensembl
Cytoband6q16.1
Allele length
AssemblyAllele length
hg3895067
hg1995067
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15910816
Samples
Known GenesTSG1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4148529
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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