A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4144017



Internal ID20022037
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:45091929..45223839hg38UCSC Ensembl
chr6:45059666..45191576hg19UCSC Ensembl
Cytoband6p21.1
Allele length
AssemblyAllele length
hg38131911
hg19131911
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15910300
Samples
Known GenesMIR586, SUPT3H
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4144017
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer