A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4143707



Internal ID20368502
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:130238410..130324640hg38UCSC Ensembl
chr6:130559555..130645785hg19UCSC Ensembl
Cytoband6q23.1
Allele length
AssemblyAllele length
hg3886231
hg1986231
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15979554
Samples
Known GenesSAMD3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4143707
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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