A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4134651



Internal ID20015267
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:158769946..158770763hg38UCSC Ensembl
chr6:159190978..159191795hg19UCSC Ensembl
Cytoband6q25.3
Allele length
AssemblyAllele length
hg38818
hg19818
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15916003
Samples
Known GenesEZR
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4134651
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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