A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4133787



Internal ID20361340
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:110783884..110791308hg38UCSC Ensembl
chr6:111105087..111112511hg19UCSC Ensembl
Cytoband6q21
Allele length
AssemblyAllele length
hg387425
hg197425
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15913984
Samples
Known GenesCDK19
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4133787
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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