A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4127444



Internal ID20010167
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:10864136..10910751hg38UCSC Ensembl
chr6:10864369..10910984hg19UCSC Ensembl
Cytoband6p24.2
Allele length
AssemblyAllele length
hg3846616
hg1946616
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15977996
Samples
Known GenesGCM2, SYCP2L
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4127444
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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