A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4111667



Internal ID20345709
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:86529853..86587127hg38UCSC Ensembl
chr4:87451006..87508280hg19UCSC Ensembl
Cytoband4q21.3
Allele length
AssemblyAllele length
hg3857275
hg1957275
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1844n166
Supporting Variantsnssv15893311
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4111667
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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