A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4111215



Internal ID20345371
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:127652459..127660902hg38UCSC Ensembl
chr4:128573614..128582057hg19UCSC Ensembl
Cytoband4q28.1
Allele length
AssemblyAllele length
hg388444
hg198444
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15893026
Samples
Known GenesINTU
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4111215
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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