A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4104789



Internal ID19993931
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:82440051..82441187hg38UCSC Ensembl
chr4:83361204..83362340hg19UCSC Ensembl
Cytoband4q21.22
Allele length
AssemblyAllele length
hg381137
hg191137
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15892995
Samples
Known GenesENOPH1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4104789
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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