A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4101530



Internal ID20338165
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:192841026..192842912hg38UCSC Ensembl
chr3:192558815..192560701hg19UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg381887
hg191887
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15885834
Samples
Known GenesMB21D2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4101530
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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