A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4097371



Internal ID20335079
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:145049485..145054916hg38UCSC Ensembl
chr4:145970637..145976068hg19UCSC Ensembl
Cytoband4q31.21
Allele length
AssemblyAllele length
hg385432
hg195432
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15895502
Samples
Known GenesANAPC10
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4097371
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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