A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4097109



Internal ID20334883
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:7676642..7676829hg38UCSC Ensembl
chr4:7678369..7678556hg19UCSC Ensembl
Cytoband4p16.1
Allele length
AssemblyAllele length
hg38188
hg19188
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15974623
Samples
Known GenesSORCS2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4097109
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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