A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4096345



Internal ID20334335
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:46862423..46871806hg38UCSC Ensembl
chr4:46864440..46873823hg19UCSC Ensembl
Cytoband4p12
Allele length
AssemblyAllele length
hg389384
hg199384
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15974104
Samples
Known GenesCOX7B2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4096345
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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