A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4092810



Internal ID20331653
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:136974353..136977348hg38UCSC Ensembl
chr3:136693195..136696190hg19UCSC Ensembl
Cytoband3q22.3
Allele length
AssemblyAllele length
hg382996
hg192996
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15886947
Samples
Known GenesIL20RB
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4092810
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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