A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4090037



Internal ID20329603
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:4078073..4273252hg38UCSC Ensembl
chr3:4119757..4314936hg19UCSC Ensembl
Cytoband3p26.1
Allele length
AssemblyAllele length
hg38195180
hg19195180
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1596n166
Supporting Variantsnssv15876555
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4090037
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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