A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4082335



Internal ID19977289
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:197514498..197522572hg38UCSC Ensembl
chr2:198379222..198387296hg19UCSC Ensembl
Cytoband2q33.1
Allele length
AssemblyAllele length
hg388075
hg198075
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15971054
Samples
Known GenesHSPE1-MOB4, MOB4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4082335
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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