A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4073067



Internal ID20317144
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:213892103..214257168hg38UCSC Ensembl
chr2:214756827..215121892hg19UCSC Ensembl
Cytoband2q34
Allele length
AssemblyAllele length
hg38365066
hg19365066
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15969996
Samples
Known GenesSPAG16
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4073067
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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