A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4068457



Internal ID20313805
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:244505735..244551920hg38UCSC Ensembl
chr1:244669037..244715222hg19UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg3846186
hg1946186
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15962975
Samples
Known GenesC1orf101
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4068457
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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