A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4065675



Internal ID20311767
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:95313914..95325428hg38UCSC Ensembl
chr2:95979662..95991176hg19UCSC Ensembl
Cytoband2q11.1
Allele length
AssemblyAllele length
hg3811515
hg1911515
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15968123
Samples
Known GenesKCNIP3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4065675
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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