A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4065451



Internal ID19964911
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:161318920..161380631hg38UCSC Ensembl
chr1:161288710..161350421hg19UCSC Ensembl
Cytoband1q23.3
Allele length
AssemblyAllele length
hg3861712
hg1961712
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15962779
Samples
Known GenesC1orf192, SDHC
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4065451
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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