A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4062716



Internal ID19962941
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:24034306..24035649hg38UCSC Ensembl
chr2:24257176..24258519hg19UCSC Ensembl
Cytoband2p23.3
Allele length
AssemblyAllele length
hg381344
hg191344
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15868138
Samples
Known GenesC2orf44
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4062716
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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