A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4062677



Internal ID20309600
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:247281080..247306050hg38UCSC Ensembl
chr1:247444382..247469352hg19UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg3824971
hg1924971
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15965214
Samples
Known GenesZNF496
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4062677
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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