A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4056825



Internal ID19834033
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:15257217..15272590hg38UCSC Ensembl
chr2:15397341..15412714hg19UCSC Ensembl
Cytoband2p24.3
Allele length
AssemblyAllele length
hg3815374
hg1915374
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15865714
Samples
Known GenesNBAS
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4056825
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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