A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4053677



Internal ID19831763
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:33505230..34280781hg38UCSC Ensembl
chr2:33730297..34505848hg19UCSC Ensembl
Cytoband2p22.3
Allele length
AssemblyAllele length
hg38775552
hg19775552
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15966433
Samples
Known GenesFAM98A, MYADML, RASGRP3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4053677
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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