A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4052031



Internal ID19830576
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:86180196..86188996hg38UCSC Ensembl
chrX:85435200..85444000hg19UCSC Ensembl
CytobandXq21.2
Allele length
AssemblyAllele length
hg388801
hg198801
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15943933
Samples
Known GenesDACH2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4052031
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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