A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4047501



Internal ID19827405
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:146802782..146821982hg38UCSC Ensembl
chrX:145884300..145903500hg19UCSC Ensembl
CytobandXq27.3
Allele length
AssemblyAllele length
hg3819201
hg1919201
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15944410
Samples
Known GenesCXorf51A, CXorf51B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4047501
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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