A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4037337



Internal ID20166951
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:101939097..101968297hg38UCSC Ensembl
chr15:102479300..102508500hg19UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg3829201
hg1929201
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15779443, nssv15779447, nssv15779453, nssv15779438, nssv15779439, nssv15779441, nssv15779442, nssv15779458, nssv15779446, nssv15779449, nssv15779464, nssv15779463, nssv15779466, nssv15779457, nssv15779445, nssv15779444, nssv15779450, nssv15779461, nssv15779440, nssv15779465, nssv15779448, nssv15779462, nssv15779459, nssv15779454, nssv15779460, nssv15779456, nssv15779455, nssv15779437, nssv15779451, nssv15779452
Samples
Known GenesFAM138E, WASH3P
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4037337
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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