A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4033309



Internal ID20164099
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:2495898..2498214hg38UCSC Ensembl
chrX:2413939..2416255hg19UCSC Ensembl
CytobandXp22.33
Allele length
AssemblyAllele length
hg382317
hg192317
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15941326
Samples
Known GenesDHRSX, ZBED1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4033309
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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