A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4025



Internal ID15202007
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:136298616..136346780hg38UCSC Ensembl
Outerchr3:136017458..136065622hg19UCSC Ensembl
Outerchr3:137500148..137548312hg18UCSC Ensembl
Outerchr3:137500156..137548320hg17UCSC Ensembl
Cytoband3q22.3
Allele length
AssemblyAllele length
hg3848165
hg1948165
hg1848165
hg1748165
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3200, nssv7037, nssv2417
SamplesNA12156, NA12878, NA18555
Known GenesPCCB, STAG1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv4025
Frequency
Sample Size9
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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