A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3843



Internal ID15201807
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:184829536..184888980hg38UCSC Ensembl
Outerchr1:184798670..184858114hg19UCSC Ensembl
Outerchr1:183065293..183124737hg18UCSC Ensembl
Outerchr1:181530327..181589771hg17UCSC Ensembl
Cytoband1q25.3
Allele length
AssemblyAllele length
hg3859445
hg1959445
hg1859445
hg1759445
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2626, nssv6025, nssv372, nssv3572, nssv4876
SamplesNA19129, NA12156, NA12878, NA19240, NA18555
Known GenesFAM129A
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3843
Frequency
Sample Size9
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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