A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3839



Internal ID15201802
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:58519895..58564972hg38UCSC Ensembl
Outerchr3:58505622..58550699hg19UCSC Ensembl
Outerchr3:58480662..58525739hg18UCSC Ensembl
Outerchr3:58480662..58525739hg17UCSC Ensembl
Cytoband3p14.2
Allele length
AssemblyAllele length
hg3845078
hg1945078
hg1845078
hg1745078
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv5969, nssv7811
SamplesNA12156, NA19129
Known GenesACOX2, FAM107A
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3839
Frequency
Sample Size9
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer