A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3800



Internal ID15201760
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:46920158..46965751hg38UCSC Ensembl
Outerchr3:46961648..47007241hg19UCSC Ensembl
Outerchr3:46936652..46982245hg18UCSC Ensembl
Outerchr3:46936652..46982245hg17UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg3845594
hg1945594
hg1845594
hg1745594
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7006
SamplesNA12156
Known GenesCCDC12
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3800
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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