A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3777



Internal ID15201734
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:180772077..180811177hg38UCSC Ensembl
Outerchr1:180741213..180780313hg19UCSC Ensembl
Outerchr1:179007836..179046936hg18UCSC Ensembl
Outerchr1:177472870..177511970hg17UCSC Ensembl
Cytoband1q25.3
Allele length
AssemblyAllele length
hg3839101
hg1939101
hg1839101
hg1739101
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7149, nssv3551
SamplesNA12156, NA12878
Known GenesXPR1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3777
Frequency
Sample Size9
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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