A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3670



Internal ID15201617
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:180797..207095hg38UCSC Ensembl
Outerchr3:222480..248778hg19UCSC Ensembl
Outerchr3:197480..223778hg18UCSC Ensembl
Outerchr3:197480..223778hg17UCSC Ensembl
Cytoband3p26.3
Allele length
AssemblyAllele length
hg3826299
hg1926299
hg1826299
hg1726299
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv10332, nssv4593, nssv2385
SamplesNA12878, NA18956, NA18555
Known GenesCHL1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3670
Frequency
Sample Size9
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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