A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3563



Internal ID15201499
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:21012779..21057225hg38UCSC Ensembl
Outerchr22:21367068..21411514hg19UCSC Ensembl
Outerchr22:19697068..19741514hg18UCSC Ensembl
Outerchr22:19691622..19736068hg17UCSC Ensembl
Cytoband22q11.21
Allele length
AssemblyAllele length
hg3844447
hg1944447
hg1844447
hg1744447
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2357
SamplesNA18555
Known GenesLOC400891, P2RX6, P2RX6P, SLC7A4, TUBA3FP
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3563
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer