A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3555902



Internal ID22424735
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:66591387..67320553hg38UCSC Ensembl
chr9:39049501..41930502hg19UCSC Ensembl
Cytoband9p12
Allele length
AssemblyAllele length
hg38729167
hg192881002
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14459991, nssv14466330
SamplesHG00512, HG00514
Known GenesCNTNAP3, FAM74A1, FAM74A3, LOC653501, SPATA31A1, SPATA31A2, SPATA31A3, SPATA31A4, SPATA31A5, SPATA31A7, ZNF658, ZNF658B
MethodSequencing
AnalysisSingle strand sequencing, and assortment analysis
PlatformStrand-seq
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3555902
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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